====== Spatialize Phylogenetic Tree ======

===== Description =====

This function spatialize phylogenetic tree by interpolates values of phylogenetic distance on the map.

===== Inputs =====

^ Name            ^ Type                                      ^ Description                                                     ^
| Input Occurences | [[csv file | csv file]] | Csv file with species occurences (colunms sp, x, y). |
| Input Phylogenetic Tree | [[tre file | tre file]] | Filogenetic tree in format ".tre" |
| Input Mask | [[Map Filename Type | Map Filename Type]] | The filename of the shape of area of study. |
| Output folder | [[Folder | Folder]] | Folder to save outputs. |
| The Tree has branch lengths | [[Boolean Value Type | Boolean Value Type]] | Choose the tipe of phylogentic tree |
| Rounds Of Nmds Search | [[Real Value Type | Real Value Type]] | Value of Maximum numbers of random starts in search |
| Spline Interpolation| [[Boolean Value Type | Boolean Value Type]] | Interpolate results by Spline |
| Kriging Interpolation| [[Boolean Value Type | Boolean Value Type]] | Interpolate results by Kriging |
| Number Of Axis | [[Real Value Type | Real Value Type]] | Define number of axis in NMDS analysis |
| Cell Size | [[Real Value Type | Real Value Type]] | Cell size of output raster|
| Spline Lambda | [[Real Value Type | Real Value Type]] | Smoothing parameter the ratio of error and process variance in spline interpolation |
| Smooth Factor Of Spline | [[Real Value Type | Real Value Type]] | Number of neighboring pixels in smooth |
| Model In Kriging Interpolation | [[Real Value Type | Real Value Type]] | Specification of the variogram model: 1- spherical, 2- exponential, 3- gaussian |
| Lags In Kriging Interpolation | [[Real Value Type | Real Value Type]] | Number of lags |
| Smooth Factor Of Kriging | [[Real Value Type | Real Value Type]] | Number of neighboring pixels in smooth |
| Classify Spline| [[Boolean Value Type | Boolean Value Type]] | Classify areas by unsupervised classification |
| Number Of Classes Of Spline | [[Real Value Type | Real Value Type]] | Number of classes in classification |
| Spline Interpolation| [[Boolean Value Type | Boolean Value Type]] | Interpolate results by Spline |
| Classify Kriging | [[Real Value Type | Real Value Type]] | Classify areas by unsupervised classification |



===== Group =====

[[BioDinamica | BioDinamica]]


===== Internal Name =====

BioDinamica